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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834269.1_cds_XP_016505539.1_18870
CDS Infomation

[gene=LOC107823411] [db_xref=GeneID:107823411] [protein=glucan endo-1,3-beta-glucosidase, basic vacuolar] [protein_id=XP_016505539.1] [location=complement(join(16268..17289,18078..18168))] [gbkey=CDS]
Sequence

ATGTCTACCTCACATAAACATAATACTCCTCAAATGGCTGCTATCACACTCCTAGGATTA
CTACTTGTTGCCAGCAGCATTGACATAGCAGGGGCTCAATCGATAGGTGTTTGCTATGGA
ATGCTAGGCAACAACTTGCCAAATCATTGGGAAGTTATACAGCTCTACAAGTCAAGAAAC
ATAGGAAGACTGAGGCTTTATGATCCAAATCATGGAGCTTTACAAGCATTAAAAGGCTCA
AATATTGAAGTTATGTTAGGACTTCCCAATTCAGATGTGAAGCACATTGCTTCCGGAATG
GAACATGCAAGATGGTGGGTACAGAAAAATGTTAAAGATTTCTGGCCAGATGTTAAGATT
AAGTATATTGCTGTTGGGAATGAAATCAGCCCTGTCACTGGCACATCTTACCTAACCTCA
TTTCTTACTCCTGCTATGGTAAATATTTACAAAGCAATTGGTGAAGCTGGTTTGGGAAAC
AACATCAAGGTCTCAACTTCTGTAGACATGACCTTGATTGGAAACTCTTATCCACCATCA
CAGGGTTCGTTTAGGAACGATGCTAGGTGGTTTGTTGATCCCATTGTTGGCTTCTTAAGG
GACACACGTGCACCTTTACTCGTTAACATTTACCCCTATTTCAGTTATTCTGGTAATCCA
GGCCAGATTTCTCTCCCCTATTCTCTTTTTACAGCACCAAATGTGGTGGTACAAGATGGT
TCCCGCCAATATAGGAACTTATTTGATGCAATGCTGGATTCTGTGTATGCTGCCCTCGAG
CGATCAGGAGGGGCATCTGTAGGGATTGTTGTGTCCGAGAGTGGCTGGCCATCTGCTGGT
GCATTTGGAGCCACATATGACAATGCAGCAACTTACTTGAGGAACTTAATTCAACACGCT
AAAGAGGGTAGCCCAAGAAAGCCTGGACCTATTGAGACCTATATATTTGCCATGTTTGAT
GAGAACAACAAGAACCCTGAACTGGAGAAACATTTTGGATTGTTTTCCCCCAACAAGCAG
CCCAAATATAATATCAACTTTGGGGTCTCTGGTGGAGTTTGGGACAGTTCAGTTGAAACT
AATGCTACTGCTTCTCTCGTAAGTGAGATGTGA

Peptide Sequence

PEP ID

XP_016505539.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase, basic vacuolar [Nicotiana tabacum]
Sequence

MSTSHKHNTPQMAAITLLGLLLVASSIDIAGAQSIGVCYGMLGNNLPNHWEVIQLYKSRN
IGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKI
KYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPS
QGSFRNDARWFVDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDG
SRQYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGATYDNAATYLRNLIQHA
KEGSPRKPGPIETYIFAMFDENNKNPELEKHFGLFSPNKQPKYNINFGVSGGVWDSSVET
NATASLVSEM

Transcript Sequence

Gene sequence data has not been registered.